Multi-level Semantic Analysis for Sports Video

There has been a huge increase in the utilization of video as one of the most preferred type of media due to its content richness for many significant applications including sports. To sustain an ongoing rapid growth of sports video, there is an emerging demand for a sophisticated content-based indexing system. Users recall video contents in a high-level abstraction while video is generally stored as an arbitrary sequence of audio-visual tracks. To bridge this gap, this paper will demonstrate the use of domain knowledge and characteristics to design the extraction of high-level concepts directly from audio-visual features. In particular, we propose a multi-level semantic analysis framework to optimize the sharing of domain characteristics

The disappearance of a narrow Mg II absorption system in quasar SDSS J165501.31+260517.4

In this letter, we present for the first time, the discovery of the disappearance of a narrow Mg II $\lambda\lambda2796,2803$ absorption system from the spectra of quasar SDSS J165501.31+260517.4 ($z_{\rm e}=1.8671$). This absorber is located at $z_{\rm abs} =1.7877$, and has a velocity offset of $8,423\rm ~km~s^{-1}$ with respect to the quasar. According to the velocity offset and the line variability, this narrow Mg II $\lambda\lambda2796,2803$ absorption system is likely intrinsic to the quasar. Since the corresponding UV continuum emission and the absorption lines of another narrow Mg II $\lambda\lambda2796,2803$ absorption system at $z_{\rm abs}=1.8656$ are very stable, we think that the disappearance of the absorption system is unlikely to be caused by the change in ionization of absorption gas. Instead, it likely arises from the motion of the absorption gas across the line of sight

Discovery of structural and functional features in RNA pseudoknots

An RNA pseudoknot consists of nonnested double-stranded stems connected by single-stranded loops. There is increasing recognition that RNA pseudoknots are one of the most prevalent RNA structures and fulfill a diverse set of biological roles within cells, and there is an expanding rate of studies into RNA pseudoknotted structures as well as increasing allocation of function. These not only produce valuable structural data but also facilitate an understanding of structural and functional characteristics in RNA molecules. PseudoBase is a database providing structural, functional, and sequence data related to RNA pseudoknots. To capture the features of RNA pseudoknots, we present a novel framework using quantitative association rule mining to analyze the pseudoknot data. The derived rules are classified into specified association groups regarding structure, function, and category of RNA pseudoknots. The discovered association rules assist biologists in filtering out significant knowledge of structure-function and structure-category relationships. A brief biological interpretation to the relationships is presented, and their potential correlations with each other are highlighted.<br /

Mining characteristic relations bind to RNA secondary structures

The identification of RNA secondary structures has been among the most exciting recent developments in biology and medical science. It has been recognized that there is an abundance of functional structures with frameshifting, regulation of translation, and splicing functions. However, the inherent signal for secondary structures is weak and generally not straightforward due to complex interleaving substrings. This makes it difficult to explore their potential functions from various structure data. Our approach, based on a collection of predicted RNA secondary structures, allows us to efficiently capture interesting characteristic relations in RNA and bring out the top-ranked rules for specified association groups. Our results not only point to a number of interesting associations and include a brief biological interpretation to them. It assists biologists in sorting out the most significant characteristic structure patterns and predicting structurefunction relationships in RNA

Mining frequent patterns for AMP-activated protein kinase regulation on skeletal muscle

BACKGROUND: AMP-activated protein kinase (AMPK) has emerged as a significant signaling intermediary that regulates metabolisms in response to energy demand and supply. An investigation into the degree of activation and deactivation of AMPK subunits under exercise can provide valuable data for understanding AMPK. In particular, the effect of AMPK on muscle cellular energy status makes this protein a promising pharmacological target for disease treatment. As more AMPK regulation data are accumulated, data mining techniques can play an important role in identifying frequent patterns in the data. Association rule mining, which is commonly used in market basket analysis, can be applied to AMPK regulation. RESULTS: This paper proposes a framework that can identify the potential correlation, either between the state of isoforms of α, β and γ subunits of AMPK, or between stimulus factors and the state of isoforms. Our approach is to apply item constraints in the closed interpretation to the itemset generation so that a threshold is specified in terms of the amount of results, rather than a fixed threshold value for all itemsets of all sizes. The derived rules from experiments are roughly analyzed. It is found that most of the extracted association rules have biological meaning and some of them were previously unknown. They indicate direction for further research. CONCLUSION: Our findings indicate that AMPK has a great impact on most metabolic actions that are related to energy demand and supply. Those actions are adjusted via its subunit isoforms under specific physical training. Thus, there are strong co-relationships between AMPK subunit isoforms and exercises. Furthermore, the subunit isoforms are correlated with each other in some cases. The methods developed here could be used when predicting these essential relationships and enable an understanding of the functions and metabolic pathways regarding AMPK

Finding coverage using incremental attribute combinations

Coverage is the range that covers only positive samples in attribute (or feature) space. Finding coverage is the kernel problem in induction algorithms because of the fact that coverage can be used as rules to describe positive samples. To reflect the characteristic of training samples, it is desirable that the large coverage that cover more positive samples. However, it is difficult to find large coverage, because the attribute space is usually very high dimensionality. Many heuristic methods such as ID3, AQ and CN2 have been proposed to find large coverage. A robust algorithm also has been proposed to find the largest coverage, but the complexities of time and space are costly when the dimensionality becomes high. To overcome this drawback, this paper proposes an algorithm that adopts incremental feature combinations to effectively find the largest coverage. In this algorithm, the irrelevant coverage can be pruned away at early stages because potentially large coverage can be found earlier. Experiments show that the space and time needed to find the largest coverage has been significantly reduced.<br /